That's not much different than other distros, because the way auto-update usually works, is it can't use root permissions or the system package manager (in any distro), so it has to install the newer version in $HOME. Once the update is installed, the system package becomes a trampoline to that.

I tried Discord, and this one seems to download some updates on first run, but the version sticks to the one from the system (0.0.127, latest is 0.0.129). So I assume it just doesn't update, or it tries to and fails.