> Maybe natural complexity is not supposed to be something we deal with, just something we live with.
Your ancestors did that, and invented unknowable gods and spirits to explain/blame everything on, so that people can give up trying to understand or manage the unmanageable.
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Although it's worth noting theres evidence the earliest civilizations like the Sumerians did this at least in part as a "fill in the blanks" exercise. The gods were their dark matter - a stand in for the problem that they were trying to predict the rains, rather then invent a suitably large father/mother to take responsibility away from them.