All good ideas, I have been doing something similar for half a year. The most important thing is to reduce bugs and ensure the code does what you wanted. Writing code tests, logging, interacting with the running app are essential. For intent realignment I like to have the agent re-read all user messages posted in that project. It only takes a few minutes even on a 10,000 message project. Then use this fresh derivation of user intent to check code and tests. For long spans of work I prefer to generate a todo list which remains as a document in the project. Each closed gate tracks feedback from the agent on what happened. This task file is also reviewed twice - once before implementation and once after. So the formula is - review agents - tests - user message logs.