I haven't seen the evidence for "raped kids", but it's certainly true that Chomsky advised and benefitted from Epstein long after any sensible person would have realized that Epstein JUST MIGHT be a bad person.
Unfortunately, Chomsky's always had a problem pulling the ripcord in similar situations. As one of his colleagues once explained, "When most people step in dogshit on the sidewalk, they scrape it off their shoe and keep walking. Chomsky gets stubborn and just keeps stepping in it again and again."
Not that this is relevant to his intellectual contributions, unless it crosses your personal line where involvement becomes complicity.
His Wikipedia article [0] gives a good summary of the connection they had.
[0] https://en.wikipedia.org/wiki/Noam_Chomsky#Friendship_with_J...
Chomsky is also somewhat unique in that he would communicate with literally anyone who wanted to talk to him. I remember seeing Manufacturing Consent for the first time in 9th grade in 1999, and I sent him an email, and he responded within the hour.